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Uncovering ecological state dynamics with hidden Markov models ArchiMer
Mcclintock, Brett T.; Langrock, Roland; Gimenez, Olivier; Cam, Emmanuelle; Borchers, David L.; Glennie, Richard; Patterson, Toby A.; Coulson, Tim.
Ecological systems can often be characterised by changes among a finite set of underlying states pertaining to individuals, populations, communities or entire ecosystems through time. Owing to the inherent difficulty of empirical field studies, ecological state dynamics operating at any level of this hierarchy can often be unobservable or ‘hidden’. Ecologists must therefore often contend with incomplete or indirect observations that are somehow related to these underlying processes. By formally disentangling state and observation processes based on simple yet powerful mathematical properties that can be used to describe many ecological phenomena, hidden Markov models (HMMs) can facilitate inferences about complex system state dynamics that might otherwise...
Tipo: Text Palavras-chave: Behavioural ecology; Community ecology; Ecosystem ecology; Hierarchical model; Movement ecology; Observation error; Population ecology; State-space model; Time series.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00655/76692/77831.pdf
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Variation in Size and Growth of the Great Scallop Pecten maximus along a Latitudinal Gradient ArchiMer
Chauvaud, Laurent; Patry, Yann; Jolivet, Aurelie; Cam, Emmanuelle; Le Goff, Clement; Strand, Oivind; Charrier, Gregory; Thebault, Julien; Lazure, Pascal; Gotthard, Karl; Clavier, Jacques.
Understanding the relationship between growth and temperature will aid in the evaluation of thermal stress and threats to ectotherms in the context of anticipated climate changes. Most Pecten maximus scallops living at high latitudes in the northern hemisphere have a larger maximum body size than individuals further south, a common pattern among many ectotherms. We investigated differences in daily shell growth among scallop populations along the Northeast Atlantic coast from Spain to Norway. This study design allowed us to address precisely whether the asymptotic size observed along a latitudinal gradient, mainly defined by a temperature gradient, results from differences in annual or daily growth rates, or a difference in the length of the growing...
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Ano: 2012 URL: http://archimer.ifremer.fr/doc/00087/19861/17506.pdf
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